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3D Structure Generation
CORINA 2D to 3D
MolSoft 2D to 3D
  
Binding Affinity Estimates
BAPPL
BAPPL-Z
  
Bioinformatics
3dSearch
Andrew Kropinski's Links
ASH
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CE 3
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DEJAVU
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EMBOSS
eMotif & eMatrix
ESyPred3D
ExPASY
FCP
FUGE Tools
HetSEL
HMMSTR/Rosetta
HOMODELLER
I-Sites
InterPro
LOCK
Membrane Protein Explorer
MVIEW
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ModWeb
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NPS@
PAPIA
Pedant
PredictProtein Server
PRIDE2
 
PROF
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Protein3D
Protein Structure Comparison
PROTEUS
Ramachandran Server
RbDe
REPRO
Rob Russel's Links
Robetta
RosettaDesign
Secondary Structure Links
Sanger Centre CGG
SMART
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SPLIT
SRS
SVMProt
Teiresias & Musca
ToPLign
UCLA/DOE Fold Server

VAST
VSNS Alignment Links
What If
  
Cavity Search
CASTp
Pocket-Finder
Q-SiteFinder
SiteEngine
  
Data Analysis
Artificial Neural Networks
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UNC QSAR Server
Unit Conversions (2)
  
Docking
FlexX
DOCK Blaster
   
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ADME/Tox WEB
ALOGPS & more
IA LogP Predictor
KowWin (logP)
miLogP & more
Molecular Knowledge
MolSoft Drug-Likeness & Property
OSIRIS
Parameter Client
PETRA
PreADMET
PSA, Volume, etc.
SPARC
VCharge
   
Protein Function
AllFuse
   
Protein Interactions
ClusPro
IPPRED
MolSoft ODA
 
Protein Properties
eF-surf
FIRST
H++
Hydrophobicity Grapher
PDB2PQR
pKD
PROPKA
         
Protomer/Tautomer Generation
tautomers
   
Superposition
BioInfo3D (proteins)
FlexS (ligands)
I2I-SiteEngine (interfaces)
SiteEngine (binding sites)
SuperPose (proteins)
   
Systems Biology
Virtual Cell
WIT
   
Visualization
ChemVis
GRASS
MolSoft PDB Viewer
MolRay
PoseViewWeb
Protein Explorer
Protein Picture Generator
WebMol

Last Updated: July 9, 2008

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